BIOT 2006 proceedings papers

Paper Title	Authors	Affiliation
Pharmacogenomics: Analyzing SNPs	Mark Ebbert, Timothy OConnor, Wesley Beckstead, Mark Clement, David McClellan	Brigham Young University
A dense multiplexed microsatellite marker set for reliable, cost effective genotyping	Robert Kolts, Elliott Richards, Sam Asby, Will Brubaker, Edward Wilcox	Brigham Young University
Molecular Coevolution of the Vertebrate Cytochrome c1 and Rieske Iron Sulfur Protein in the Cytochrome bc1 Complex	Kimberly Baer, David A. McClellan	Brigham Young University
Effects of Gap Open and Gap Extension Penalties	Hyrum Carroll, Perry Ridge, Mark Clement, Quinn Snell	Brigham Young University
Keynote Speaker -- High Throughput Mouse Knockouts	Wade Walke	Lexicon Genetics, Inc.
Computational Analysis of the Distribution of Short Repeated Motifs in Human Genomic Sequences	Abanish Singh, Nikola Stojanovic	University of Texas at Arlington
Evolutionary selective pressure on three mitochondrial SNPs is consistent with their influence on metabolic efficiency in Pima Indians	Srikar Chamala, Wesley A. Beckstead, Mark J. Rowe, David McClellan	Brigham Young University
Protein Interactions Extrapolated from Feline Protein Complexes	Shawn Martin, Zisu Mao, Linda Chan, Suraiya Rasheed	Sandia National Laboratories, University of Southern California
Comparing the Performance of Several Popular Machine Learning Algorithms	Raja Loganantharaj	University of Louisiana
Prediction of Protein Coding Regions on a Programmable VLIW Architecture	Adeel Yusuf, Dawood Khan, Shoab Khan	Centre for Advanced Studies in Engineering, Pakistan
Conservative adjustment of permutation p-values when the number of permutations is limited	Yinglei Lai	George Washington University
Invited Speaker - protein-DNA interactions and identification of HTH DNA-binding motifs	Changhui (Charles) Yan	Utah State University
Keynote Speaker - The cancer Biomedical Informatics Grid (caBIG)	Lewis Frey	University of Utah
Improving Performance of DNA Sequencing-by-Hybridization with Gapped-Probes via Domain Knowledge	Zong He Cai, Hon Wai Leong	National University of Singapore
An algorithm with linear expected running time for string editing with substitutions and substring reversals	Abdullah Arslan	University of Vermont
On Predicting Secondary Structure Transition	Raja Loganantharaj, Vivek Philip	University of Louisiana
Invited Speaker - Protein folding on the hexagonal lattice in the HP model	Minghui Jiang	Utah State University
Semantic Based Retrieval of Biomedical Literature	Raja Loganantharaj, Vardarajan Narayan	University of Louisiana
Preliminary Analysis of the Effects of Selection on Physicochemical Properties in the Nicotinic Acetylcholine Receptor	Richard L. Smith, Seth A. Loughmiller, David A McClellan	Brigham Young University
HTML Table Interpretation by Sibling Page Comparison in the Molecular Biology Domain	Cui Tao, David Embley	Brigham Young University
Genetic Code Population Dynamics in a Simulated System of Protocells	Jerrisha Butler, Francis Uzowulu, David Digby, William Seffens	Clark Atlanta University